I have a sitemap file that has been submitted to Google, and has been processed, according to Google Webmaster Tools.
As per GWT for 2013-05-31, 8255 web-pages are submitted, but only 8209 are indexed.
Which 46 of the 8255 pages are not indexed?
Under the Google Webmaster Tools menu:
Health -> Index Status -> Advanced (tab)
Downloading the "Total Indexed" and comparing that against both the "Total Crawled" and the links in your sitemap should give you an idea of which were not indexed. You could use a file comparison application or spreadsheet to sort and organize the data accordingly.
I would suggest waiting a bit longer however as Google might still be crawling links outside your site or otherwise not finished.